XVI. 4. Step 4: Retreatment Options

XVI.4

Step 4: Retreatment Options

If the first FMT brings no response, several paths remain — switching donors, stronger induction, longer consolidation, or an adjuvant therapy — each matched to the cause of non-response.

Retreatment optionIndication / timing / notes
Donor changeIndicated if Phase 0 data suggests suboptimal compatibility. Select donor with highest predicted complementarity to recipient dysbiosis profile. Most evidence-supported retreatment strategy.
Intensified inductionAdditional colonoscopic FMT or high-dose capsule loading (3–5 consecutive days). Indicated in engraftment failure without clear donor-incompatibility signal. Can be combined with donor change.
Extended consolidationExtend Phase 2 by 4–8 weeks before declaring non-response in chronic inflammatory conditions. Evidence supports duration-dependent response in UC and Crohn's.
Protocol pause + exposome reset2–4 week pause with intensive exposome correction before re-starting. Indicated when Category C factors identified. Allows ecological stabilization before re-inoculation.
Combination with adjunct therapyFMT + biologic (IBD), FMT + dietary intervention (metabolic), FMT + psychological intervention (IBS). Evidence for combination emerging; discuss with clinical team.
Compassionate repeat cyclesFor partial but genuine responders: additional protocol cycles after 3–6 month rest period. Decision based on quality-of-life benefit, biomarker trends, and patient preference.

Table 22 – Retreatment options by non-response scenario # Structured retreatment framework: donor change, protocol modification, and dose escalation options by clinical context.

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