XXIII.4

4. Contraindication matrix

Clinical risk view — foods ranked across eight categories: FODMAP, histamine, oxalate, purine, iodine, mercury, anticoagulant, pregnancy.

Function: clinical risk cross-indexGoal: tailoring to the individual patient, drug interaction, food safetyNotation: 🔴 absolute / 🟠 high / 🟡 moderateSource: EFSA, FDA, EMA, Monash, peer-reviewed RCTs
🎯 What is this appendix for?

Across the 196 chapters of the Food Sources v1.5 book, contraindications and risks are scattered throughout. This appendix gathers into a single view the clinically relevant risks, grouped by eight criteria. A dietitian, clinician or donor-diet planner thus gets quick decision support for individual patient screening.

The matrix only contains those foods where the risk is clinically relevant — that is, not merely theoretical but requires management based on an official regulatory body (EFSA / FDA / EMA / Monash / WHO) or a peer-reviewed RCT.

📊 Notation system
NotationInterpretation
🔴Absolute contraindication — prohibited in the given clinical group (e.g. pregnancy + nutmeg, MAO inhibitor + tyramine-containing cheese)
🟠High risk — to be avoided in the given condition, may only be used under medical supervision
🟡Moderate risk — control, dose titration or monitoring required

The notation applies to the clinical condition, not to the average healthy consumer. The healthy population can safely consume most of the items.

1. FODMAP sensitivity (IBS, SIBO)

Clinical relevance: 50—75% of IBS patients show symptomatic worsening with high-FODMAP foods (Monash University evidence base). During the low-FODMAP elimination phase (4—6 weeks) the following are to be avoided, then can be tested in the reintroduction phase.

🟠 — High FODMAP (Monash red) — avoid during the elimination phase:

ChapterRisk
I.1 ArtichokeFructan-dominant (classic red)
I.3 AsparagusFructan + raffinose
I.4 ChicoryInulin
I.5 OnionFructan concentrate
I.6 GarlicFructan concentrate
I.7 LeekFructan
I.14 Jerusalem artichokeInulin (one of the highest natural sources)
II.1 LentilGOS + raffinose
II.2 ChickpeaGOS + raffinose
II.3 BeanGOS + raffinose
IV.2 PearFructose + sorbitol
IV.19 Fresh figHigh fructose
IV.21 PersimmonHigh fructose
IV.23 WatermelonFructose + polyol
V.1 PruneSorbitol + fructose
V.2 DateHigh fructose + glucose
V.3 RaisinFructose concentrate
V.4 HoneyFructose concentrate
VII.3 RyeFructan (sourdough significantly reduces it)
VII.4 WheatFructan
XIII.4 Agave inulinBranched fructan

🟡 — Moderate FODMAP (yellow / titratable):

ChapterNote
I.17 CabbageMannitol fraction (50—75 g green, higher amounts red)
IV.1 AppleFructose (green up to a moderate portion)
IV.8 MangoFructose (40—50 g green)
IV.20 PineappleFructan (portions above 200 g red)
VII.16 Sourdough breadLong sourdough reduces it — small portions green
XV.28 KombuchaCarbohydrates (portions above 180 ml red)
2. Histamine intolerance / DAO deficiency

Clinical relevance: In DAO-deficient patients or those on MAO inhibitors, high-histamine foods or histamine liberators can trigger headache, urticaria, facial flushing, hypotension / hypertension response. Increased attention during antidepressant treatment.

🔴 — Absolute contraindication during MAO-inhibitor (phenelzine, tranylcypromine, moclobemide, selegiline) treatment:

ChapterRisk
IX.3 Aged cheesesHigh tyramine (cheddar, blue, parmesan: > 1000 mg/kg) — hypertensive crisis
VIII.5 NattoHigh tyramine + Bacillus-derived biogenic amines
XII.7 Tuna (poorly chilled)Classic scombroid histamine poisoning
XII.10 Mackerel (poorly chilled)Scombroid histamine classic
XXI.2 Brewer's yeast (active)"Cheese effect" — tyramine accumulation

🟠 — High histamine / histamine liberator:

ChapterRisk
VIII.1 SauerkrautAged ferment — high histamine
VIII.2 Brined cucumberAged LAB ferment
VIII.3 KimchiAged ferment + spice load
VIII.4 MisoLong aging — free amino acids
VIII.6 TempehRhizopus fermentation
VIII.8 Fermented mixed vegetablesLAB fermentation
VIII.9 Table olivesGreek-style barrel ferment
I.10 TomatoClassic histamine liberator + contains histamine
IV.9 StrawberryHistamine liberator (anaphylactoid-like reactions)
IV.20 PineappleBromelain histamine liberator
XII.5 HerringScombroid potential (fatty fish)
XII.8 SalmonScombroid potential
XII.13 EelFatty fish — histamine accumulation
XV.28 KombuchaYeast ferment, biogenic amines
XVIII.1 Royal jellyAnaphylaxis risk (asthmatic-pollen-allergic)
XVIII.3 Bee pollenDocumented anaphylaxis cases

🟡 — Moderate (case-dependent control):

ChapterNote
IV.10 RaspberryModerate liberator — moderate portions OK
VIII.10 Apple cider vinegarAcetic acid–acetate mediated, small portion OK
XVIII.2 PropolisContact dermatitis, systemic reaction rare
3. Oxalate sensitivity (kidney-stone tendency, hyperoxaluria)

Clinical relevance: For patients with a calcium-oxalate kidney-stone tendency, restriction of high-oxalate foods is recommended. Hyperoxaluria + low urinary calcium + Crohn's disease is an extreme risk.

🟠 — High oxalate content (≥ 100 mg / 100 g):

ChapterRisk
I.18 SpinachClassic high-oxalate green (≈ 970 mg/100 g)
I.11 BeetrootHigh (≈ 670 mg/100 g)
III.6 Chia seedHigh (≈ 800 mg/100 g)
III.8 Sesame seedHigh (≈ 480 mg/100 g) + more concentrated in tahini form
III.2 AlmondHigh (≈ 470 mg/100 g)
VII.12 AmaranthClassic pseudocereal oxalate
VII.10 BuckwheatModerate-high
XV.1 TurmericModerate-high (≈ 1900 mg/100 g powder, but daily doses are small)

🟡 — Moderate oxalate (control advised for those prone to kidney stones):

ChapterNote
III.1 WalnutModerate (≈ 75 mg/100 g)
III.7 FlaxseedModerate (≈ 250 mg/100 g)
III.9 TigernutModerate
IV.3 KiwifruitCalcium-oxalate microcrystals in the seeds
IV.13 Black chokeberryModerate
VII.9 QuinoaSoaking reduces it
VII.6 SorghumModerate
4. Purine (gout, hyperuricemia)

Clinical relevance: A gout attack can be triggered by purine intake. For hyperuricemic patients, moderation of high-purine foods is clinically justified (Choi 2004 NEJM + ACR 2020 guideline).

🟠 — High purine (> 200 mg / 100 g):

ChapterRisk
XII.6 Sardine300—500 mg/100 g — one of the highest
XII.5 HerringHigh
XII.7 TunaHigh (~ 290 mg/100 g)
XII.10 MackerelHigh
XII.1 Fatty marine fish (in general)High (anchovy, sprat)
XII.2 Mussel / oysterHigh (mussels classically)
VI.1 ShiitakeHigh (~ 380 mg/100 g dried)
VI.6 Oyster mushroomHigh
VI.5 ReishiHigh (in extracts)
XXI.1 Nutritional yeast~ 150—200 mg/2 tbsp (burdensome for gout patients)
XXI.2 Brewer's yeast300—500 mg/100 g — high

🟡 — Moderate purine (moderate consumption advised):

ChapterNote
II.1 LentilClassic legume purine
II.2 ChickpeaLegume purine
II.3 BeanLegume purine
XII.4 Rainbow troutModerate
XII.8 SalmonModerate
XII.3 SquidModerate
I.3 AsparagusModerate
I.9 CauliflowerModerate (classic "gout vegetable")
VI.2 White mushroomModerate
5. Iodine (thyroid disease, Hashimoto, Graves)

Clinical relevance: In patients with Hashimoto's disease, Graves' disease, autoimmune thyroiditis and L-thyroxine-treated hypothyroidism, high iodine intake can worsen control. EFSA adult UL = 600 µg/day.

🔴 — Absolutely to be avoided (extreme iodine load):

ChapterRisk
XIV.1 Brown seaweed (kombu)1500—2500 µg/g — a single 5 g portion = 7,500—12,500 µg = 12—21× the daily UL
XIV.6 Hijiki300—600 µg/g + inorganic arsenic (dual risk)

🟠 — High iodine (controlled dosing):

ChapterRisk
XIV.5 Dulse50—150 µg/g (5 g = 250—750 µg)
XIV.7 Irish moss50—90 µg/g

🟡 — Moderate iodine (to be monitored):

ChapterNote
XIV.4 Nori10—40 µg/g (one sheet ≈ 30—50 µg, safe zone)
XII.11 Cod~ 75 µg/100 g (50% of the daily requirement)
XII.12 Flatfish (sole, plaice)~ 30 µg/100 g
IX.1 YogurtModerate — a significant European iodine source
IX.2 KefirModerate
6. Mercury (pregnancy, children, neuro-sensitive)

Clinical relevance: Methylmercury is neurotoxic to the developing fetal and young-child brain. WHO JECFA = 1.6 µg/kg/week tolerable intake. FDA "Choices to Avoid" prohibited in pregnancy.

🔴 — FDA "Choices to Avoid" — prohibited in pregnancy + childhood:

ChapterMercury
XII.7 Tuna (bluefin)0.89—1.5 mg/kg
XII.7 Tuna (bigeye)0.69 mg/kg
XII.10 King mackerel (≠ Atlantic!)~ 0.7 mg/kg

🟠 — High mercury (max. 1 portion per week in pregnancy):

ChapterMercury
XII.7 Tuna (albacore "white")0.35 mg/kg
XII.7 Tuna (yellowfin fresh)0.35 mg/kg
XII.12 Flatfish (Atlantic halibut)0.2—0.4 mg/kg
XII.13 EelModerate-high (depends on freshwater source)

🟡 — Moderate mercury (monitoring worthwhile):

ChapterNote
XII.12 Greenland halibutModerate

FDA "Best Choices" — safe even in pregnancy (2—3× per week): Skipjack ("light tuna"), trout, herring, sardine, salmon, cod, sole, plaice, mussel, oyster.

7. Anticoagulant interaction (warfarin, DOAC, antiplatelet)

Clinical relevance: Vitamin K-containing vegetables cause warfarin INR disturbance (constant intake recommended, not sudden change). Bleeding-enhancing phytochemicals pose a risk alongside any anticoagulant / antiplatelet treatment (warfarin, DOAC: apixaban, rivaroxaban, dabigatran; ASA, clopidogrel).

🔴 — Absolute contraindication during warfarin:

ChapterRisk
VIII.5 NattoMK-7 (775—1000 µg/100 g) — a single portion disturbs the INR for days

🔴 — Absolute contraindication alongside CYP3A4-substrate drugs (certain statins, calcium channel blockers, cyclosporine):

ChapterRisk
IV.6 Citrus (grapefruit, blood orange)Furanocoumarin CYP3A4 inhibition — plasma-level increase

🟠 — High vitamin K (warfarin: constant intake mandatory, not sudden):

ChapterNote
I.18 SpinachClassic high-K (≈ 480 µg/100 g)
I.17 CabbageHigh K
I.8 Cruciferous vegetables (broccoli, kale)High K
VIII.1 SauerkrautHigh K + fermentation can increase it
X.1 Green tea / MatchaVitamin K (matcha more concentrated)

🟠 — Bleeding-enhancing / antiplatelet effect at high doses:

ChapterMechanism
I.6 GarlicAllicin antiplatelet (≥ 4 g/day)
XV.2 Ginger≥ 4 g/day antiplatelet + COX-1 inhibition
XV.7 CloveEugenol inhibits platelet aggregation
XV.6 ChiliCapsaicin antithrombotic at high doses
XV.4 Black pepperPiperine CYP3A4 inhibition (drug-level increase)
XV.5 HorseradishAITC mild bleeding enhancement
III.6 Chia seed, III.7 FlaxseedALA → omega-3 anticoagulant effect
XII.1—XII.13 FishOmega-3 anticoagulant effect (≥ 3 g/day supplement)

🟡 — Moderate (stop 2 weeks before surgery):

ChapterNote
XV.1 TurmericHigh-dose supplement
XV.19 RosemaryHigh-dose supplement
IV.4 PomegranateCYP3A4 mild inhibition + ellagic acid antiplatelet
X.11 Rosehip teaHigh vitamin C in an anticoagulant context
8. Pregnancy and breastfeeding

Clinical relevance: In pregnancy there is an increased risk of Listeria monocytogenes (raw milk, cold-smoked fish), Salmonella (raw egg, sprouts), retinol-A hypervitaminosis (teratogenic > 3 mg/day), high-dose essential oils (uterotonic), mercury and arsenic (fetal neurotoxicity).

🔴 — Absolutely prohibited in pregnancy:

ChapterRisk
XIV.6 HijikiInorganic arsenic accumulation (IARC 1)
XII.7 Tuna (bluefin/bigeye)Mercury
XII.10 King mackerelMercury
IX.3 Aged cheeses (from raw milk: Roquefort, raw-milk Brie, Munster)Listeria monocytogenes
XV.14 Star anise (Japanese: Illicium anisatum)Anisatin convulsion
XV.26 Nutmeg (high dose)Myristicin teratogenic
XIX.2 Alfalfa sproutSLE-syndrome induction + Salmonella
XVIII.3 Bee pollenAllergen + botulism spore (also prohibited for infants)

🟠 — To be avoided or only under medical supervision:

ChapterRisk
XII.13 EelRetinol-A ≥ 1000 µg/100 g + high fat
XII.11 Cod liver oil (high dose)Retinol-A teratogenic ≥ 3 mg/day
VIII.5 NattoHigh MK-7 + Bacillus spore
XV.20 SageThujone uterotonic + high dose
XV.19 Rosemary (high dose)Uterotonic + camphor
XV.13 Anise (high dose)Estragole genotoxic
XV.12 Fennel (high dose)Estragole genotoxic
XV.22 Basil (high dose)Estragole genotoxic
XVII.1 Chicken egg (raw)Salmonella
XVII.4 Duck / goose egg (raw)Salmonella (waterfowl: higher rate)
XII.12 Flatfish (cold-smoked)Listeria
XII.9 Fish roe (unpasteurized)Listeria
XIX.3, XIX.5 Sprouts (raw)Salmonella / STEC
XVIII.1 Royal jellyAnaphylaxis risk

🟡 — Moderate (moderate consumption OK under medical supervision):

ChapterNote
XII.7 Tuna (skipjack "light")1 portion per week is safe
XIV.1 Kombu (thoroughly cooked)Soaking + cooking reduces the iodine
XV.1 Turmeric (culinary amount)High-dose supplement not advised
V.4 Honey (infant under 1 year: prohibited)Botulism spore
🔍 How to use the matrix?

Patient screening: Before a new donor or patient, review the clinical diagnosis and remove from the list those chapters that the given condition makes advisable to avoid. From the remaining foods, rank by evidence level (Appendix A).

Drug interaction: Alongside anticoagulant / antiplatelet / MAO-inhibitor / CYP3A4-substrate treatment, always review lists 2, 7 and 8.

Pregnancy: Every 🔴 item in list 8 is to be automatically excluded. 🟠 only under medical supervision.

Pediatrics: Infant under 1 year: honey (V.4) is absolutely prohibited (botulism spore). High mercury (list 3 🔴) is also prohibited in childhood.

📌 Audit note

The matrix was compiled from the contraindication sections of the existing 196 chapters. The source of each item is peer-reviewed (EFSA, FDA, EMA, WHO, Cochrane, Monash University, classic clinical RCTs). The notation level is based on the recommendation of the clinical regulatory authority — not on lay "toxic" lists, and not on general "to be avoided" warnings.

The matrix does not replace individual clinical judgment. For a given patient, the full clinical picture (comorbidity, medication list, allergy history, pregnancy, age) must be weighed. As new evidence is updated, the matrix is also updated.


PG
Food Handbook · Authors: Dr. Patay Gábor — physician, microbiota specialist · Dr. Bezzegh Attila — medical director, clinical microbiologist · Dra. Anna Munar — physician, exposome specialist
MicroBiome Bank — medically reviewed professional content. Last updated: 2026.