Literaturverzeichnis
Die vollständige Bibliographie des "MicroBiota Handbook" – die originalen wissenschaftlichen Quellen hinter den Referenznummern, die in den Kapiteln erscheinen.
Was enthält die Bibliographie?
Dieser Anhang versammelt die vollständige Bibliographie des Buches an einem Ort: jede wissenschaftliche Quelle, die in irgendeinem Kapitel des Bandes zitiert wird. Die Nummern `[12]`, `[325]` und weitere im Fließtext verweisen auf die unten aufgeführten Einträge – die Nummerierung läuft über das gesamte Buch hinweg, sodass dieselbe Referenznummer `[N]` immer auf dieselbe Quelle verweist. Die überwiegende Mehrheit der aufgeführten Publikationen ist in peer-reviewten Fachzeitschriften erschienen und auch in indexierten Datenbanken (PubMed/NCBI, Crossref) auffindbar, von renommierten Fachverlagen.
Warum steht unter jedem Eintrag eine Zusammenfassung?
Unter jeder Quelle finden Sie eine Synopse von 5–6 Sätzen. Dabei handelt es sich nicht um das offizielle Abstract des Artikels, sondern um eine kurze, allgemein verständliche Zusammenfassung, die den Hintergrund der Studie, die verwendete Methode, das wichtigste Ergebnis und dessen klinische oder praktische Bedeutung darstellt. Ihr Zweck ist es, der Leserin und dem Leser eine rasche Entscheidung darüber zu ermöglichen, ob sich die Lektüre der vollständigen Publikation lohnt und ob sie zur eigenen Fragestellung oder zur Situation der Patientin bzw. des Patienten passt. Die Zusammenfassungen helfen Ihnen, sich auch ohne direkten Zugang zum Volltext zu orientieren.
Wie wird es benutzt?
Unter jedem Eintrag finden Sie die Zeile "Zitiert in": Ein Klick auf die dort angezeigte Kapitelnummer führt Sie an die Stelle des Buches zurück, an der die Quelle zitiert wird. Innerhalb des jeweiligen Kapitels bringt ein Klick auf die Markierung `[N]` die Leserin und den Leser hierher zurück, zur Bibliographie – Sie können sich also in beide Richtungen frei bewegen. Ein Klick auf die mit "Link" gekennzeichnete Referenz öffnet die Publikation auf der Seite des Verlags oder von NCBI, wo sich – sofern der Artikel frei zugänglich ist (Open Access) – auch der Volltext lesen lässt.
Literatur
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Short summary of the cited reference is in preparation.
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Short summary of the cited reference is in preparation.
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Short summary of the cited reference is in preparation.
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Short summary of the cited reference is in preparation.
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Short summary of the cited reference is in preparation.
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[518] Parodi A, Paolino S, Greco A et al. Small intestinal bacterial overgrowth in rosacea: clinical effectiveness of its eradication. Clin Gastroenterol Hepatol. 2008. Link
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[519] Kang DW, Adams JB, Coleman DM et al. Long-term benefit of Microbiota Transfer Therapy on autism symptoms and gut microbiota. Sci Rep. 2019. Link
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[520] Sampson TR, Debelius JW, Thron T et al. Gut microbiota regulate motor deficits and neuroinflammation in a model of Parkinson's disease. Cell. 2016. Link
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[521] Liu RT, Walsh RFL, Sheehan AE. Prebiotics and probiotics for depression and anxiety: a systematic review and meta-analysis of controlled clinical trials. Neurosci Biobehav Rev. 2019. Link
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[522] Dominy SS, Lynch C, Ermini F et al. Porphyromonas gingivalis in Alzheimer's disease brains: evidence for disease causation and treatment with small-molecule inhibitors. Sci Adv. 2019. Link
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[523] Scher JU, Sczesnak A, Longman RS et al. Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis. eLife. 2013. Link
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[524] Vaziri ND, Yuan J, Khazaeli M et al. Disintegration of colonic epithelial tight junction in uremia. Am J Nephrol. 2013. Link
Short summary of the cited reference is in preparation.
[525] Pasini E, Aquilani R, Testa C et al. Pathogenic gut flora in patients with chronic heart failure. JACC Heart Fail. 2016. Link
Short summary of the cited reference is in preparation.
[526] Anand S, Mande SS. Diet, microbiota and gut-lung connection. Front Microbiol. 2018. Link
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[541] Knight R, Vrbanac A, Taylor BC et al. Best practices for analysing microbiomes. Nat Rev Microbiol. 2018. Link
Short summary of the cited reference is in preparation.
[542] McDonald D, Hyde E, Debelius JW et al. American Gut: an Open Platform for Citizen Science Microbiome Research. mSystems. 2018. Link
Short summary of the cited reference is in preparation.
[543] Allaband C, McDonald D, Vázquez-Baeza Y et al. Microbiome 101: Studying, Analyzing, and Interpreting Gut Microbiome Data for Clinicians. Clin Gastroenterol Hepatol. 2019. Link
Short summary of the cited reference is in preparation.
[545] Walsham NE, Sherwood RA. Fecal calprotectin in inflammatory bowel disease. Clin Exp Gastroenterol. 2016. Link
Short summary of the cited reference is in preparation.
[546] Scheffler L, Crane A, Heyne H et al. Widely Used Commercial ELISA Does Not Detect Precursor of Haptoglobin2, but Recognizes Properdin as a Potential Second Member of the Zonulin Family. Front Endocrinol. 2018. Link
Short summary of the cited reference is in preparation.
[547] Rezaie A, Buresi M, Lembo A et al. Hydrogen and methane-based breath testing in gastrointestinal disorders: The North American Consensus. Am J Gastroenterol. 2017. Link
Short summary of the cited reference is in preparation.
[548] Eisenhofer R, Minich JJ, Marotz C, Cooper A, Knight R, Weyrich LS. Contamination in Low Microbial Biomass Microbiome Studies: Issues and Recommendations. Trends Microbiol. 2019. Link
Short summary of the cited reference is in preparation.
[549] Karstens L, Asquith M, Davin S et al. Controlling for Contaminants in Low-Biomass 16S rRNA Gene Sequencing Experiments. mSystems. 2019. Link
Short summary of the cited reference is in preparation.
[558] Kennedy KM, de Goffau MC, Perez-Muñoz ME et al. Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies. Nature. 2023. Link
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[559] Drossman DA, Hasler WL. Rome IV — Functional GI Disorders: Disorders of Gut-Brain Interaction. Gastroenterology. 2016. Link
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[560] Thomas RL, Jiang L, Adams JS et al. Vitamin D Metabolites and the Gut Microbiome in Older Men. Nat Commun. 2020. Link
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[561] Hill C, Guarner F, Reid G et al. The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic. Nat Rev Gastroenterol Hepatol. 2014. Link
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[562] Su GL, Ko CW, Bercik P et al. AGA Clinical Practice Guidelines on the Role of Probiotics in the Management of Gastrointestinal Disorders. Gastroenterology. 2020. Link
Short summary of the cited reference is in preparation.
[563] Gibson GR, Hutkins R, Sanders ME et al. Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics. Nat Rev Gastroenterol Hepatol. 2017. Link
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[564] Salminen S, Collado MC, Endo A et al. The International Scientific Association of Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of postbiotics. Nat Rev Gastroenterol Hepatol. 2021. Link
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[565] Wilson BC, Vatanen T, Cutfield WS, O'Sullivan JM. The Super-Donor Phenomenon in Fecal Microbiota Transplantation. Front Cell Infect Microbiol. 2019. Link
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[588] Ahmed S, Spence JD. Mediterranean diet, the gut microbiome and meditation: a systematic review. Nutrients. 2022. Link
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[592] Mutlu EA, Comba IY, Cho T et al. Inhalational exposure to particulate matter air pollution alters the composition of the gut microbiome. Environ Pollut. 2018. Link
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[593] Duan H, Yu L, Tian F et al. Gut microbiota: A target for heavy metal toxicity and a probiotic protective strategy. Sci Total Environ. 2020. Link
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[599] Bokulich NA, Chung J, Battaglia T et al. Antibiotics, birth mode, and diet shape microbiome maturation during early life. Sci Transl Med. 2016. Link
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[600] Imhann F, Bonder MJ, Vich Vila A et al. Proton pump inhibitors affect the gut microbiome. Gut. 2016. Link
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[601] Targownik LE, Fisher DA, Saini SD. AGA Clinical Practice Update on De-Prescribing of Proton Pump Inhibitors: Expert Review. Gastroenterology. 2022. Link
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[605] Plottel CS, Blaser MJ. Microbiome and malignancy. Cell Host Microbe. 2011. Link
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[609] Berg G, Rybakova D, Fischer D et al. Microbiome definition re-visited: old concepts and new challenges. Microbiome. 2020. Link
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[610] Sender R, Fuchs S, Milo R. Revised estimates for the number of human and bacteria cells in the body. PLoS Biol. 2016. Link
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[612] Earle KA, Billings G, Sigal M et al. Quantitative imaging of gut microbiota spatial organization. Cell Host Microbe. 2015. Link
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[613] Smith PM, Howitt MR, Panikov N et al. The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis. Science. 2013. Link
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[615] Atarashi K, Tanoue T, Oshima K et al. Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota. Nature. 2013. Link
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[617] Lindell AE, Zimmermann-Kogadeeva M, Patil KR. Multimodal interactions of drugs, natural compounds and pollutants with the gut microbiota. Nat Rev Microbiol. 2022. Link
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[619] Mishra A, Lai GC, Yao LJ et al. Microbial exposure during early human development primes fetal immune cells. Cell. 2021. Link
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[623] Stewart CJ, Ajami NJ, O'Brien JL et al. Temporal development of the gut microbiome in early childhood from the TEDDY study. Nature. 2018. Link
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[624] von Hertzen L, Hanski I, Haahtela T. Natural immunity. Biodiversity loss and inflammatory diseases are two global megatrends that might be related. EMBO Rep. 2011. Link
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[625] Fitzstevens JL, Smith KC, Hagadorn JI et al. Systematic review of the human milk microbiota. Nutr Clin Pract. 2017. Link
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[626] Biagi E, Nylund L, Candela M et al. Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians. PLoS One. 2010. Link
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[628] Rothschild D, Weissbrod O, Barkan E et al. Environment dominates over host genetics in shaping human gut microbiota. Nature. 2018. Link
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[629] Kurilshikov A, Medina-Gomez C, Bacigalupe R et al. Large-scale association analyses identify host factors influencing human gut microbiome composition. Nat Genet. 2021. Link
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[630] Cortese R, Lu L, Yu Y et al. Epigenome-Microbiome crosstalk: a potential new paradigm influencing neonatal susceptibility to disease. Epigenetics. 2016. Link
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[631] Asnicar F, Berry SE, Valdes AM et al. Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals. Nat Med. 2021. Link
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[632] Berry SE, Valdes AM, Drew DA et al. Human postprandial responses to food and potential for precision nutrition. Nat Med. 2020. Link
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[634] Schmitt FCF, Brenner T, Uhle F et al. Gut microbiome patterns correlate with higher postoperative complication rates after pancreatic surgery. BMC Microbiol. 2019. Link
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[636] Barton W, Penney NC, Cronin O et al. The microbiome of professional athletes differs from that of more sedentary subjects in composition and particularly at the functional metabolic level. Gut. 2018. Link
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[638] Chaix A, Manoogian ENC, Melkani GC, Panda S. Time-Restricted Eating to Prevent and Manage Chronic Metabolic Diseases. Annu Rev Nutr. 2019. Link
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[2614] Chassaing B, Compher C, Bonhomme B et al. Randomized Controlled-Feeding Study of Dietary Emulsifier Carboxymethylcellulose Reveals Detrimental Impacts on the Gut Microbiota and Metabolome. Gastroenterology. 2022. Link
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[2616] Wilkinson MJ, Manoogian ENC, Zadourian A et al. Ten-Hour Time-Restricted Eating Reduces Weight, Blood Pressure, and Atherogenic Lipids in Patients with Metabolic Syndrome. Cell Metabolism. 2020. Link
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[2719] Setchell KDR, Clerici C. Equol: history, chemistry, and formation. The Journal of Nutrition. 2010. Link
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E.2 Weiterführende Literatur für Laien
Die folgenden Lesevorschläge richten sich an Leserinnen und Leser, die das in diesem Buch gezeichnete Bild in einen Kontext stellen möchten – es handelt sich um erzählende und populärwissenschaftliche Werke, nicht um Zeitschriftenartikel. Auswahlkriterium ist die wissenschaftliche Verlässlichkeit: Diese Liste schließt Titel aus, die klinische Evidenz durch Versprechen auf Marketingniveau ersetzen. Leicht erhältliche Ausgaben in gedruckter Form oder als E-Book.
Populärwissenschaftliche Bücher
- Spector T. The Diet Myth. 2015 – nach wie vor eine der besten Übersichten für Laien
- Knight R. Follow Your Gut. 2015 (TED Books)
- Sonnenburg J, Sonnenburg E. The Good Gut. 2015
- Enders G. Gut: The Inside Story of Our Body's Most Underrated Organ. 2015
Vertrauenswürdige Websites
- ISAPP (International Scientific Association for Probiotics and Prebiotics): isappscience.org
- American Gut Project: humanfoodproject.com/americangut
- WGO (World Gastroenterology Organisation) Global Guidelines: worldgastroenterology.org
Podcasts
- Stanford Center for Continuing Medical Education podcasts
- American Gastroenterological Association podcasts
E.3 Weiterführende Literatur für Klinikerinnen und Kliniker
Empfehlungen für die klinische Leserschaft: systematische Übersichtsarbeiten, klinische Leitlinien und fachliche Konsensdokumente, die die Mikrobiom-Medizin in klinisch relevanter Tiefe darstellen. Der Schwerpunkt der Auswahl liegt auf Publikationen der Jahre 2022–2025 (bereits klassische Meilensteinarbeiten ausgenommen). Alle Einträge enthalten einen PubMed-/DOI-Zugang.
Aktuelle systematische Übersichtsarbeiten
- Jährliche Mikrobiom-Übersichten in Nat Rev Gastroenterol Hepatol
- Lancet Gastroenterology & Hepatology
Wichtige Fachzeitschriften
- Gut (BMJ)
- Gastroenterology (AGA)
- Cell Host & Microbe
- Microbiome (BMC)
- Nature Reviews Gastroenterology & Hepatology
Konferenzen und Fachgesellschaften
- ISAPP-Jahrestagungen
- DDW (Digestive Disease Week)
- UEG Week (United European Gastroenterology Week)
- Nationale gastroenterologische Fachgesellschaften
- Regionale Mikrobiom-Konsortien
Konsensdokumente als Rahmen
- ISAPP-Konsenspapiere zu Probiotika, Präbiotika und Postbiotika ([@ref-561, @ref-563, @ref-564])
- ESCMID-, ECCO-Leitlinien zu CED
- Rom-IV-Kriterien für funktionelle Darmerkrankungen