2. Références

La bibliographie complète du « MicroBiota Guide » – les sources scientifiques originales auxquelles renvoient les numéros de référence qui apparaissent dans les chapitres.

Que contient la bibliographie ?

Cette annexe rassemble en un seul endroit la bibliographie complète du livre : toutes les références scientifiques citées dans un chapitre quelconque du volume. Les numéros `[12]`, `[325]` et autres présents dans le corps du texte renvoient aux entrées listées ci-dessous – la numérotation court sur l'ensemble du livre, si bien qu'un même numéro de référence `[N]` renvoie toujours à la même source. La grande majorité des publications listées sont parues dans des revues à comité de lecture et sont également repérables dans des bases de données indexées (PubMed/NCBI, Crossref), chez des éditeurs professionnels reconnus.

Pourquoi y a-t-il un résumé sous chaque entrée ?

Sous chaque référence figure une synthèse de 5–6 phrases. Il ne s'agit pas du résumé officiel de l'article, mais d'un court résumé en langage clair présentant le contexte de l'étude, la méthode employée, le résultat principal et sa portée clinique ou pratique. Son but est de permettre au lecteur de décider rapidement si la publication complète mérite d'être lue et si elle correspond à sa propre question ou à la situation du patient. Ces résumés vous aident à vous orienter même sans accès direct au texte intégral.

Comment l'utiliser ?

Sous chaque entrée, vous trouverez la ligne « Cité dans » : en cliquant sur le numéro de chapitre qui y figure, vous revenez à l'endroit du livre où la source est citée. Dans ce chapitre, un clic sur le marqueur `[N]` ramène le lecteur ici, dans la bibliographie – vous pouvez donc circuler librement dans les deux sens. Un clic sur la référence signalée par « Lien » ouvre la publication sur le site de l'éditeur ou de NCBI, où – si l'article est en libre accès (open access) – le texte intégral peut également être consulté.

Références

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[42] Dahl WJ, Zhu H, Guan X. Dietary Fiber and Gut Microbiota in the Propagation of Short-Chain Fatty Acids. Am J Clin Nutr. 2023. Link

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[44] Zipursky JS, Sidorsky TI, Freedman CA, Sidorsky MN, Kirkland KB. Patient attitudes toward the use of fecal microbiota transplantation in the treatment of recurrent Clostridium difficile infection. Clin Infect Dis. 2012. Link

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[45] Kao D, Roach B, Silva M et al. Effect of Oral Capsule– vs Colonoscopy-Delivered Fecal Microbiota Transplantation on Recurrent Clostridium difficile Infection: A Randomized Clinical Trial. JAMA. 2017. Link

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[46] Ianiro G, Bibbo S, Scaldaferri F et al. Fecal Microbiota Transplantation in Inflammatory Bowel Disease: Beyond the Excitement. Medicine (Baltimore). 2014. Link

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[47] Staley C, Khoruts A, Sadowsky MJ. Contemporary Applications of Fecal Microbiota Transplantation to Treat Intestinal Diseases in Humans. Arch Med Res. 2017. Link

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[48] Smith MB, Kelly C, Alm EJ. Policy: How to regulate faecal transplants. Nature. 2014. Link

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[49] DeFilipp Z, Bloom PP, Torres Soto M et al. Drug-Resistant E. coli Bacteremia (the presence of bacteria in the bloodstream) Transmitted by Fecal Microbiota Transplant. N Engl J Med. 2019. Link

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[50] Marcella C, Cui B, Kelly CR, Ianiro G, Cammarota G, Zhang F. Systematic review: the global incidence of faecal microbiota transplantation-related adverse events from 2000 to 2020. Aliment Pharmacol Ther. 2000. Link

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[51] Hourigan SK, Oliva-Hemker M. Fecal Microbiota Transplantation in Children: A Brief Review. Pediatr Res. 2016. Link

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[52] Cook MD, Allen JM, Pence BD et al. Exercise and gut immune function: evidence of alterations in colon immune cell homeostasis and microbiome characteristics with exercise training. Immunol Cell Biol. 2016. Link

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[53] Cryan JF, O'Riordan KJ, Cowan CSM et al. The Microbiota-Gut-Brain Axis. Physiol Rev. 2019. Link

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[54] Sokol H, Landman C, Seksik P et al. Fecal microbiota transplantation to maintain remission in Crohn's disease: a pilot randomized controlled study. Microbiome. 2020. Link

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[55] Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R. Bacterial community variation in human body habitats across space and time. Science. 2009. Link

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[57] Furusawa Y, Obata Y, Fukuda S et al. Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells. Nature. 2013. Link

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[58] Baxter NT, Schmidt AW, Venkataraman A, Kim KS, Martens EC, Schloss PD. Dynamics of Human Gut Microbiota and Short-Chain Fatty Acids in Response to Dietary Interventions with Three Fermentable Fibers. mBio. 2019. Link

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[59] Thaiss CA, Zeevi D, Levy M et al. Transkingdom control of microbiota diurnal oscillations promotes metabolic homeostasis. Cell. 2014. Link

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[60] Benedict C, Vogel H, Jonas W et al. Gut microbiota and glucometabolic alterations in response to recurrent partial sleep deprivation in normal-weight young individuals. Mol Metab. 2016. Link

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